IL_6WNW_192

3D structure

PDB id

6WNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6WNW_192 not in the Motif Atlas

Geometric match to IL_6RTI_005

Geometric discrepancy: 0.3972

The information below is about IL_6RTI_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_14688.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

5

Unit IDs

6WNW|1|4|C|2231
6WNW|1|4|C|2232
6WNW|1|4|U|2233
*
6WNW|1|4|A|2312
6WNW|1|4|U|2313
6WNW|1|4|G|2314

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains

Chain a

50S ribosomal protein L1