IL_6WOO_071
3D structure
- PDB id
- 6WOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUCUAAC*GUAAUC
- Length
- 13 nucleotides
- Bulged bases
- 6WOO|1|2|A|1516
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WOO_071 not in the Motif Atlas
- Homologous match to IL_4V88_460
- Geometric discrepancy: 0.2794
- The information below is about IL_4V88_460
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_77092.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6WOO|1|2|G|1488
6WOO|1|2|U|1489
6WOO|1|2|C|1490
6WOO|1|2|U|1491
6WOO|1|2|A|1492
6WOO|1|2|A|1493
6WOO|1|2|C|1494
*
6WOO|1|2|G|1513
6WOO|1|2|U|1514
6WOO|1|2|A|1515
6WOO|1|2|A|1516
6WOO|1|2|U|1517
6WOO|1|2|C|1518
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain DD
- uS3
- Chain TT
- eS19
- Chain UU
- uS10
- Chain dd
- uS14
Coloring options: