3D structure

PDB id
6WOO (explore in PDB, NAKB, or RNA 3D Hub)
Description
CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
GUUCCGGGG*CUUGAC
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6WOO|1|5|G|1013
6WOO|1|5|U|1014
6WOO|1|5|U|1015
6WOO|1|5|C|1016
6WOO|1|5|C|1017
6WOO|1|5|G|1018
6WOO|1|5|G|1019
6WOO|1|5|G|1020
6WOO|1|5|G|1021
*
6WOO|1|5|C|1032
6WOO|1|5|U|1033
6WOO|1|5|U|1034
6WOO|1|5|G|1035
6WOO|1|5|A|1036
6WOO|1|5|C|1037

Current chains

Chain 5
25S ribosomal RNA

Nearby chains

Chain D
uL18
Chain I
uL16

Coloring options:

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