IL_6WOO_128

3D structure

PDB id

6WOO (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUCCGGGG*CUUGAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WOO|1|5|G|1013
6WOO|1|5|U|1014
6WOO|1|5|U|1015
6WOO|1|5|C|1016
6WOO|1|5|C|1017
6WOO|1|5|G|1018
6WOO|1|5|G|1019
6WOO|1|5|G|1020
6WOO|1|5|G|1021
*
6WOO|1|5|C|1032
6WOO|1|5|U|1033
6WOO|1|5|U|1034
6WOO|1|5|G|1035
6WOO|1|5|A|1036
6WOO|1|5|C|1037

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain D

uL18

Chain I

uL16