IL_6WOO_139

3D structure

PDB id

6WOO (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UCUAGACAG*CCGAA

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WOO|1|5|U|1218
6WOO|1|5|C|1219
6WOO|1|5|U|1220
6WOO|1|5|A|1221
6WOO|1|5|G|1222
6WOO|1|5|A|1223
6WOO|1|5|C|1224
6WOO|1|5|A|1225
6WOO|1|5|G|1226
*
6WOO|1|5|C|1283
6WOO|1|5|C|1284
6WOO|1|5|G|1285
6WOO|1|5|A|1286
6WOO|1|5|A|1287

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain S

eL20

Chain r

uL10