IL_6WOO_225

3D structure

PDB id

6WOO (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUAGAG*CGAUC

Length

11 nucleotides

Bulged bases

6WOO|1|5|U|3341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WOO|1|5|G|3340
6WOO|1|5|U|3341
6WOO|1|5|A|3342
6WOO|1|5|G|3343
6WOO|1|5|A|3344
6WOO|1|5|G|3345
*
6WOO|1|5|C|3360
6WOO|1|5|G|3361
6WOO|1|5|A|3362
6WOO|1|5|U|3363
6WOO|1|5|C|3364

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain II

eS8

Chain R

eL19

Chain U

eL22

Chain W

eL24