IL_6WOO_238

3D structure

PDB id

6WOO (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGCUAACCUUGA*UCUUGGCGAACC

Length

24 nucleotides

Bulged bases

6WOO|1|2|C|704, 6WOO|1|2|C|731, 6WOO|1|2|A|733

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WOO|1|2|G|702
6WOO|1|2|G|703
6WOO|1|2|C|704
6WOO|1|2|U|705
6WOO|1|2|A|706
6WOO|1|2|A|707
6WOO|1|2|C|708
6WOO|1|2|C|709
6WOO|1|2|U|710
6WOO|1|2|U|711
6WOO|1|2|G|712
6WOO|1|2|A|713
*
6WOO|1|2|U|725
6WOO|1|2|C|726
6WOO|1|2|U|727
6WOO|1|2|U|728
6WOO|1|2|G|729
6WOO|1|2|G|730
6WOO|1|2|C|731
6WOO|1|2|G|732
6WOO|1|2|A|733
6WOO|1|2|A|734
6WOO|1|2|C|735
6WOO|1|2|C|736

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain EE

eS4

Chain GG

eS6