IL_6WOO_252
3D structure
- PDB id
- 6WOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGGUAGUGAGGGC*GUAGGUCUCUUGUAGAUGCUACAAUUAC
- Length
- 41 nucleotides
- Bulged bases
- 6WOO|1|5|G|1961, 6WOO|1|5|G|1962, 6WOO|1|5|A|2069, 6WOO|1|5|U|2076, 6WOO|1|5|A|2082, 6WOO|1|5|U|2083, 6WOO|1|5|C|2085
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6WOO|1|5|G|1952
6WOO|1|5|G|1953
6WOO|1|5|G|1954
6WOO|1|5|U|1955
6WOO|1|5|A|1956
6WOO|1|5|G|1957
6WOO|1|5|U|1958
6WOO|1|5|G|1959
6WOO|1|5|A|1960
6WOO|1|5|G|1961
6WOO|1|5|G|1962
6WOO|1|5|G|1963
6WOO|1|5|C|1964
*
6WOO|1|5|G|2067
6WOO|1|5|U|2068
6WOO|1|5|A|2069
6WOO|1|5|G|2070
6WOO|1|5|G|2071
6WOO|1|5|U|2072
6WOO|1|5|C|2073
6WOO|1|5|U|2074
6WOO|1|5|C|2075
6WOO|1|5|U|2076
6WOO|1|5|U|2077
6WOO|1|5|G|2078
6WOO|1|5|U|2079
6WOO|1|5|A|2080
6WOO|1|5|G|2081
6WOO|1|5|A|2082
6WOO|1|5|U|2083
6WOO|1|5|G|2084
6WOO|1|5|C|2085
6WOO|1|5|U|2086
6WOO|1|5|A|2087
6WOO|1|5|C|2088
6WOO|1|5|A|2089
6WOO|1|5|A|2090
6WOO|1|5|U|2091
6WOO|1|5|U|2092
6WOO|1|5|A|2093
6WOO|1|5|C|2094
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain R
- eL19
- Chain U
- eL22
Coloring options: