IL_6WOO_258

3D structure

PDB id

6WOO (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAACGG*CUUG

Length

10 nucleotides

Bulged bases

6WOO|1|5|U|3259

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WOO|1|5|C|3225
6WOO|1|5|A|3226
6WOO|1|5|A|3227
6WOO|1|5|C|3228
6WOO|1|5|G|3229
6WOO|1|5|G|3230
*
6WOO|1|5|C|3257
6WOO|1|5|U|3258
6WOO|1|5|U|3259
6WOO|1|5|G|3260

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain E

eL6

Chain M

eL14

Chain O

uL13

Chain f

eL33