IL_6WQN_011
3D structure
- PDB id
- 6WQN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCAC*GAGUGAAAUAGAAC
- Length
- 18 nucleotides
- Bulged bases
- 6WQN|1|1|U|549, 6WQN|1|1|A|553
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WQN_011 not in the Motif Atlas
- Geometric match to IL_4WF9_015
- Geometric discrepancy: 0.1592
- The information below is about IL_4WF9_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44923.1
- Basepair signature
- cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 9
Unit IDs
6WQN|1|1|G|527
6WQN|1|1|C|528
6WQN|1|1|A|529
6WQN|1|1|C|530
*
6WQN|1|1|G|541
6WQN|1|1|A|542
6WQN|1|1|G|543
6WQN|1|1|U|544
6WQN|1|1|G|545
6WQN|1|1|A|546
6WQN|1|1|A|547
6WQN|1|1|A|548
6WQN|1|1|U|549
6WQN|1|1|A|550
6WQN|1|1|G|551
6WQN|1|1|A|552
6WQN|1|1|A|553
6WQN|1|1|C|554
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain E
- 50S ribosomal protein L22
- Chain G
- 50S ribosomal protein L24
Coloring options: