IL_6WQN_018

3D structure

PDB id

6WQN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UC*GAA

Length

5 nucleotides

Bulged bases

6WQN|1|1|A|809

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6WQN_018 not in the Motif Atlas

Geometric match to IL_4WF9_022

Geometric discrepancy: 0.1494

The information below is about IL_4WF9_022

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

6WQN|1|1|U|742
6WQN|1|1|C|743
*
6WQN|1|1|G|808
6WQN|1|1|A|809
6WQN|1|1|A|810

Current chains

Chain 1

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L2