IL_6WQN_024

3D structure

PDB id

6WQN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAUG*UUAA

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6WQN_024 not in the Motif Atlas

Homologous match to IL_4WF9_029

Geometric discrepancy: 0.2704

The information below is about IL_4WF9_029

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01742.1

Basepair signature

cWW-L-cWW-R-cWW

Number of instances in this motif group

3

Unit IDs

6WQN|1|1|U|889
6WQN|1|1|G|890
6WQN|1|1|A|891
6WQN|1|1|U|892
6WQN|1|1|G|893
*
6WQN|1|1|U|975
6WQN|1|1|U|976
6WQN|1|1|A|977
6WQN|1|1|A|978

Current chains

Chain 1

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L30