IL_6WQN_109
3D structure
- PDB id
- 6WQN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- ACCA*UGU
- Length
- 7 nucleotides
- Bulged bases
- 6WQN|1|1|C|1039
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WQN_109 not in the Motif Atlas
- Geometric match to IL_5J7L_009
- Geometric discrepancy: 0.2462
- The information below is about IL_5J7L_009
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_57744.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 22
Unit IDs
6WQN|1|1|A|1037
6WQN|1|1|C|1038
6WQN|1|1|C|1039
6WQN|1|1|A|1040
*
6WQN|1|1|U|1203
6WQN|1|1|G|1204
6WQN|1|1|U|1205
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L20
- Chain D
- 50S ribosomal protein L21
- Chain M
- 50S ribosomal protein L30
- Chain V
- 50S ribosomal protein L13
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