IL_6WQQ_001
3D structure
- PDB id
- 6WQQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, radezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WQQ_001 not in the Motif Atlas
- Homologous match to IL_4WF9_001
- Geometric discrepancy: 0.1013
- The information below is about IL_4WF9_001
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_22311.1
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
6WQQ|1|1|G|24
6WQQ|1|1|U|25
6WQQ|1|1|G|26
6WQQ|1|1|G|27
6WQQ|1|1|A|28
6WQQ|1|1|U|29
6WQQ|1|1|G|30
*
6WQQ|1|1|C|555
6WQQ|1|1|U|556
6WQQ|1|1|G|557
6WQQ|1|1|A|558
6WQQ|1|1|A|559
6WQQ|1|1|A|560
6WQQ|1|1|C|561
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L20
- Chain E
- 50S ribosomal protein L22
- Chain N
- 50S ribosomal protein L32
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