IL_6WQQ_008
3D structure
- PDB id
- 6WQQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, radezolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUUAGUAG*CGAAACG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WQQ_008 not in the Motif Atlas
- Homologous match to IL_4WF9_009
- Geometric discrepancy: 0.0845
- The information below is about IL_4WF9_009
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.1
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 18
Unit IDs
6WQQ|1|1|C|241
6WQQ|1|1|U|242
6WQQ|1|1|U|243
6WQQ|1|1|A|244
6WQQ|1|1|G|245
6WQQ|1|1|U|246
6WQQ|1|1|A|247
6WQQ|1|1|G|248
*
6WQQ|1|1|C|256
6WQQ|1|1|G|257
6WQQ|1|1|A|258
6WQQ|1|1|A|259
6WQQ|1|1|A|260
6WQQ|1|1|C|261
6WQQ|1|1|G|262
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain Q
- 50S ribosomal protein L35
- Chain X
- 50S ribosomal protein L15
Coloring options: