IL_6WRS_024

3D structure

PDB id

6WRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAUG*UUAA

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6WRS_024 not in the Motif Atlas

Homologous match to IL_4WF9_029

Geometric discrepancy: 0.188

The information below is about IL_4WF9_029

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01742.1

Basepair signature

cWW-L-cWW-R-cWW

Number of instances in this motif group

3

Unit IDs

6WRS|1|1|U|889
6WRS|1|1|G|890
6WRS|1|1|A|891
6WRS|1|1|U|892
6WRS|1|1|G|893
*
6WRS|1|1|U|975
6WRS|1|1|U|976
6WRS|1|1|A|977
6WRS|1|1|A|978

Current chains

Chain 1

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L30