IL_6WRS_095

3D structure

PDB id

6WRS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, tedizolid

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AGG*UACU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6WRS_095 not in the Motif Atlas

Geometric match to IL_7A0S_092

Geometric discrepancy: 0.3515

The information below is about IL_7A0S_092

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_08770.1

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

5

Unit IDs

6WRS|1|1|A|2857
6WRS|1|1|G|2858
6WRS|1|1|G|2859
*
6WRS|1|1|U|2898
6WRS|1|1|A|2899
6WRS|1|1|C|2900
6WRS|1|1|U|2901

Current chains

Chain 1

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L3

Chain Z

50S ribosomal protein L17