IL_6WRU_042
3D structure
- PDB id
- 6WRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGUUGAAG*UGGAG
- Length
- 13 nucleotides
- Bulged bases
- 6WRU|1|1|U|1249
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WRU_042 not in the Motif Atlas
- Homologous match to IL_7RQB_047
- Geometric discrepancy: 0.1048
- The information below is about IL_7RQB_047
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_70923.2
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 28
Unit IDs
6WRU|1|1|C|1246
6WRU|1|1|G|1247
6WRU|1|1|U|1248
6WRU|1|1|U|1249
6WRU|1|1|G|1250
6WRU|1|1|A|1251
6WRU|1|1|A|1252
6WRU|1|1|G|1253
*
6WRU|1|1|U|1272
6WRU|1|1|G|1273
6WRU|1|1|G|1274
6WRU|1|1|A|1275
6WRU|1|1|G|1276
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L20
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