IL_6X9Q_044
3D structure
- PDB id
- 6X9Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 27 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- CCA*UGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6X9Q_044 not in the Motif Atlas
- Geometric match to IL_4P3T_002
- Geometric discrepancy: 0.3387
- The information below is about IL_4P3T_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_01472.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
6X9Q|1|D|C|998
6X9Q|1|D|C|999
6X9Q|1|D|A|1000
*
6X9Q|1|D|U|1040
6X9Q|1|D|G|1041
6X9Q|1|D|A|1042
6X9Q|1|D|G|1043
Current chains
- Chain D
- 16S rRNA
Nearby chains
No other chains within 10ÅColoring options: