IL_6XA1_029

3D structure

PDB id

6XA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a drug-like compound stalled human translation termination complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AAGG*CAGCAGCACU

Length

14 nucleotides

Bulged bases

6XA1|1|L5|A|919, 6XA1|1|L5|C|921, 6XA1|1|L5|A|922, 6XA1|1|L5|C|923

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XA1|1|L5|A|723
6XA1|1|L5|A|724
6XA1|1|L5|G|725
6XA1|1|L5|G|726
*
6XA1|1|L5|C|915
6XA1|1|L5|A|916
6XA1|1|L5|G|917
6XA1|1|L5|C|918
6XA1|1|L5|A|919
6XA1|1|L5|G|920
6XA1|1|L5|C|921
6XA1|1|L5|A|922
6XA1|1|L5|C|923
6XA1|1|L5|U|924

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a