IL_6XA1_058

3D structure

PDB id

6XA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a drug-like compound stalled human translation termination complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CUCGCAGACCCGACGCCCGCCACG*CG

Length

26 nucleotides

Bulged bases

6XA1|1|L5|C|1694, 6XA1|1|L5|G|1695, 6XA1|1|L5|C|1696, 6XA1|1|L5|C|1701

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XA1|1|L5|C|1681
6XA1|1|L5|U|1682
6XA1|1|L5|C|1683
6XA1|1|L5|G|1684
6XA1|1|L5|C|1685
6XA1|1|L5|A|1686
6XA1|1|L5|G|1687
6XA1|1|L5|A|1688
6XA1|1|L5|C|1689
6XA1|1|L5|C|1690
6XA1|1|L5|C|1691
6XA1|1|L5|G|1692
6XA1|1|L5|A|1693
6XA1|1|L5|C|1694
6XA1|1|L5|G|1695
6XA1|1|L5|C|1696
6XA1|1|L5|C|1701
6XA1|1|L5|C|1702
6XA1|1|L5|G|1703
6XA1|1|L5|C|1704
6XA1|1|L5|C|1705
6XA1|1|L5|A|1706
6XA1|1|L5|C|1707
6XA1|1|L5|G|1708
*
6XA1|1|L5|C|1828
6XA1|1|L5|G|1829

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LF

60S ribosomal protein L7

Chain LQ

60S ribosomal protein L18

Chain LT

60S ribosomal protein L21

Chain Lb

60S ribosomal protein L29