IL_6XA1_062

3D structure

PDB id

6XA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a drug-like compound stalled human translation termination complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GAUUAGA*UA(PSU)(PSU)CUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XA1|1|L5|G|1732
6XA1|1|L5|A|1733
6XA1|1|L5|U|1734
6XA1|1|L5|U|1735
6XA1|1|L5|A|1736
6XA1|1|L5|G|1737
6XA1|1|L5|A|1738
*
6XA1|1|L5|U|1766
6XA1|1|L5|A|1767
6XA1|1|L5|PSU|1768
6XA1|1|L5|PSU|1769
6XA1|1|L5|C|1770
6XA1|1|L5|U|1771
6XA1|1|L5|C|1772

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L7

5S ribosomal RNA; 5S rRNA

Chain LD

60S ribosomal protein L5

Chain LI

60S ribosomal protein L10-like