IL_6XA1_063

3D structure

PDB id

6XA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a drug-like compound stalled human translation termination complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GUCUUGG*UCAAC

Length

12 nucleotides

Bulged bases

6XA1|1|L5|U|1744

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XA1|1|L5|G|1740
6XA1|1|L5|U|1741
6XA1|1|L5|C|1742
6XA1|1|L5|U|1743
6XA1|1|L5|U|1744
6XA1|1|L5|G|1745
6XA1|1|L5|G|1746
*
6XA1|1|L5|U|1760
6XA1|1|L5|C|1761
6XA1|1|L5|A|1762
6XA1|1|L5|A|1763
6XA1|1|L5|C|1764

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LD

60S ribosomal protein L5

Chain LI

60S ribosomal protein L10-like

Chain LJ

60S ribosomal protein L11