IL_6XA1_097

3D structure

PDB id

6XA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a drug-like compound stalled human translation termination complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGGUCGG*CGGCGCCUAGC

Length

18 nucleotides

Bulged bases

6XA1|1|L5|C|2892, 6XA1|1|L5|G|2893, 6XA1|1|L5|A|3575

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XA1|1|L5|G|2888
6XA1|1|L5|G|2889
6XA1|1|L5|G|2890
6XA1|1|L5|U|2891
6XA1|1|L5|C|2892
6XA1|1|L5|G|2893
6XA1|1|L5|G|2894
*
6XA1|1|L5|C|3567
6XA1|1|L5|G|3568
6XA1|1|L5|G|3569
6XA1|1|L5|C|3570
6XA1|1|L5|G|3571
6XA1|1|L5|C|3572
6XA1|1|L5|C|3573
6XA1|1|L5|U|3574
6XA1|1|L5|A|3575
6XA1|1|L5|G|3576
6XA1|1|L5|C|3577

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LR

60S ribosomal protein L19

Chain SI

40S ribosomal protein S8

Chain SL

40S ribosomal protein S11