IL_6XA1_127

3D structure

PDB id

6XA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a drug-like compound stalled human translation termination complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGC(PSU)UG*UGA(PSU)CC

Length

12 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XA1|1|L5|G|4370
6XA1|1|L5|G|4371
6XA1|1|L5|C|4372
6XA1|1|L5|PSU|4373
6XA1|1|L5|U|4374
6XA1|1|L5|G|4375
*
6XA1|1|L5|U|4409
6XA1|1|L5|G|4410
6XA1|1|L5|A|4411
6XA1|1|L5|PSU|4412
6XA1|1|L5|C|4413
6XA1|1|L5|C|4414

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LI

60S ribosomal protein L10-like

Chain Lb

60S ribosomal protein L29

Chain j

Eukaryotic peptide chain release factor subunit 1