IL_6XA1_164

3D structure

PDB id

6XA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a drug-like compound stalled human translation termination complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GCAGAG*CGAUC

Length

11 nucleotides

Bulged bases

6XA1|1|L5|C|4978

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XA1|1|L5|G|4977
6XA1|1|L5|C|4978
6XA1|1|L5|A|4979
6XA1|1|L5|G|4980
6XA1|1|L5|A|4981
6XA1|1|L5|G|4982
*
6XA1|1|L5|C|4997
6XA1|1|L5|G|4998
6XA1|1|L5|A|4999
6XA1|1|L5|U|5000
6XA1|1|L5|C|5001

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LR

60S ribosomal protein L19

Chain LW

60S ribosomal protein L24

Chain SI

40S ribosomal protein S8