IL_6XA1_185

3D structure

PDB id

6XA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a drug-like compound stalled human translation termination complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GCACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

6XA1|1|S2|C|142

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XA1|1|S2|G|130
6XA1|1|S2|C|140
6XA1|1|S2|A|141
6XA1|1|S2|C|142
6XA1|1|S2|U|143
6XA1|1|S2|U|144
*
6XA1|1|S2|A|175
6XA1|1|S2|U|176
6XA1|1|S2|G|177
6XA1|1|S2|C|178
6XA1|1|S2|C|179
6XA1|1|S2|G|180
6XA1|1|S2|A|181
6XA1|1|S2|C|182

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SG

40S ribosomal protein S6