IL_6XA1_236

3D structure

PDB id

6XA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a drug-like compound stalled human translation termination complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGACAGGA*UUCC

Length

12 nucleotides

Bulged bases

6XA1|1|S2|G|1285

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XA1|1|S2|G|1280
6XA1|1|S2|G|1281
6XA1|1|S2|A|1282
6XA1|1|S2|C|1283
6XA1|1|S2|A|1284
6XA1|1|S2|G|1285
6XA1|1|S2|G|1286
6XA1|1|S2|A|1287
*
6XA1|1|S2|U|1314
6XA1|1|S2|U|1315
6XA1|1|S2|C|1316
6XA1|1|S2|C|1317

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SK

40S ribosomal protein S10

Chain SM

40S ribosomal protein S12

Chain Sf

40S ribosomal protein S27a