IL_6XA1_279
3D structure
- PDB id
- 6XA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a drug-like compound stalled human translation termination complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CAGUCGAGAGUGGACGGGAGCGGCGGGCCGGAGCCC*GGACGCUACG
- Length
- 46 nucleotides
- Bulged bases
- 6XA1|1|L5|G|2083, 6XA1|1|L5|U|2084, 6XA1|1|L5|G|2090, 6XA1|1|L5|A|2240, 6XA1|1|L5|G|2241, 6XA1|1|L5|C|2242, 6XA1|1|L5|C|2253, 6XA1|1|L5|U|2254, 6XA1|1|L5|C|2256
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XA1|1|L5|C|2074
6XA1|1|L5|A|2075
6XA1|1|L5|G|2076
6XA1|1|L5|U|2077
6XA1|1|L5|C|2078
6XA1|1|L5|G|2079
6XA1|1|L5|A|2080
6XA1|1|L5|G|2081
6XA1|1|L5|A|2082
6XA1|1|L5|G|2083
6XA1|1|L5|U|2084
6XA1|1|L5|G|2085
6XA1|1|L5|G|2086
6XA1|1|L5|A|2087
6XA1|1|L5|C|2088
6XA1|1|L5|G|2089
6XA1|1|L5|G|2090
6XA1|1|L5|G|2091
6XA1|1|L5|A|2092
6XA1|1|L5|G|2093
6XA1|1|L5|C|2094
6XA1|1|L5|G|2095
6XA1|1|L5|G|2096
6XA1|1|L5|C|2097
6XA1|1|L5|G|2098
6XA1|1|L5|G|2099
6XA1|1|L5|G|2100
6XA1|1|L5|C|2236
6XA1|1|L5|C|2237
6XA1|1|L5|G|2238
6XA1|1|L5|G|2239
6XA1|1|L5|A|2240
6XA1|1|L5|G|2241
6XA1|1|L5|C|2242
6XA1|1|L5|C|2243
6XA1|1|L5|C|2244
*
6XA1|1|L5|G|2248
6XA1|1|L5|G|2249
6XA1|1|L5|A|2250
6XA1|1|L5|C|2251
6XA1|1|L5|G|2252
6XA1|1|L5|C|2253
6XA1|1|L5|U|2254
6XA1|1|L5|A|2255
6XA1|1|L5|C|2256
6XA1|1|L5|G|2257
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4
- Chain LE
- 60S ribosomal protein L6
- Chain LF
- 60S ribosomal protein L7
- Chain LQ
- 60S ribosomal protein L18
- Chain Lb
- 60S ribosomal protein L29
- Chain Lr
- 60S ribosomal protein L28
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