IL_6XA1_297

3D structure

PDB id

6XA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a drug-like compound stalled human translation termination complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

ACAU(PSU)U*ACCA(PSU)

Length

11 nucleotides

Bulged bases

6XA1|1|L5|C|4640, 6XA1|1|L5|C|4641

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XA1|1|L5|A|4594
6XA1|1|L5|C|4595
6XA1|1|L5|A|4596
6XA1|1|L5|U|4597
6XA1|1|L5|PSU|4598
6XA1|1|L5|U|4599
*
6XA1|1|L5|A|4639
6XA1|1|L5|C|4640
6XA1|1|L5|C|4641
6XA1|1|L5|A|4642
6XA1|1|L5|PSU|4643

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LV

60S ribosomal protein L23

Chain LW

60S ribosomal protein L24