IL_6XE0_037
3D structure
- PDB id
- 6XE0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of NusG-CTD bound to 70S ribosome (30S: NusG-CTD fragment)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- CAAAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XE0_037 not in the Motif Atlas
- Homologous match to IL_4LFB_033
- Geometric discrepancy: 0.1044
- The information below is about IL_4LFB_033
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
6XE0|1|W|C|779
6XE0|1|W|A|780
6XE0|1|W|A|781
6XE0|1|W|A|782
6XE0|1|W|C|783
*
6XE0|1|W|G|799
6XE0|1|W|G|800
6XE0|1|W|U|801
6XE0|1|W|A|802
6XE0|1|W|G|803
Current chains
- Chain W
- 16s rRNA
Nearby chains
- Chain J
- 30S ribosomal protein S11
- Chain U
- 30S ribosomal protein S21
Coloring options: