IL_6XE0_045

3D structure

PDB id

6XE0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of NusG-CTD bound to 70S ribosome (30S: NusG-CTD fragment)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

6XE0|1|W|U|1030, 6XE0|1|W|G|1032

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XE0|1|W|G|1003
6XE0|1|W|A|1004
6XE0|1|W|A|1005
6XE0|1|W|G|1006
*
6XE0|1|W|U|1023
6XE0|1|W|G|1024
6XE0|1|W|U|1025
6XE0|1|W|G|1026
6XE0|1|W|C|1027
6XE0|1|W|C|1028
6XE0|1|W|U|1029
6XE0|1|W|U|1030
6XE0|1|W|C|1031
6XE0|1|W|G|1032
6XE0|1|W|G|1033
6XE0|1|W|G|1034
6XE0|1|W|A|1035
6XE0|1|W|A|1036
6XE0|1|W|C|1037

Current chains

Chain W

16s rRNA

Nearby chains

Chain M

30S ribosomal protein S14