IL_6XGF_108
3D structure
- PDB id
- 6XGF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation complex B (TTC-B) containing an 30 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- GUUG*CAUC
- Length
- 8 nucleotides
- Bulged bases
- 6XGF|1|a|U|1061
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XGF_108 not in the Motif Atlas
- Homologous match to IL_5J7L_285
- Geometric discrepancy: 0.2561
- The information below is about IL_5J7L_285
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_92446.2
- Basepair signature
- cWW-cWW-R-L-L
- Number of instances in this motif group
- 5
Unit IDs
6XGF|1|a|G|1059
6XGF|1|a|U|1060
6XGF|1|a|U|1061
6XGF|1|a|G|1062
*
6XGF|1|a|C|1076
6XGF|1|a|A|1077
6XGF|1|a|U|1078
6XGF|1|a|C|1079
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain Y
- 50S ribosomal protein L11
Coloring options: