IL_6XHW_051

3D structure

PDB id

6XHW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

UG*CACAA

Length

7 nucleotides

Bulged bases

6XHW|1|1A|C|1584

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6XHW_051 not in the Motif Atlas

Homologous match to IL_7RQB_054

Geometric discrepancy: 0.1096

The information below is about IL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_67474.4

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

3

Unit IDs

6XHW|1|1A|U|1415
6XHW|1|1A|G|1416
*
6XHW|1|1A|C|1582
6XHW|1|1A|A|1583
6XHW|1|1A|C|1584
6XHW|1|1A|A|1586
6XHW|1|1A|A|1587

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains