IL_6XHW_154
3D structure
- PDB id
- 6XHW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 6XHW|1|1a|C|1054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XHW_154 not in the Motif Atlas
- Homologous match to IL_4LFB_044
- Geometric discrepancy: 0.0836
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_76319.5
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
6XHW|1|1a|U|1052
6XHW|1|1a|G|1053
6XHW|1|1a|C|1054
6XHW|1|1a|A|1055
6XHW|1|1a|U|1056
*
6XHW|1|1a|A|1204
6XHW|1|1a|U|1205
6XHW|1|1a|G|1206
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1c
- 30S ribosomal protein S3
- Chain 1j
- 30S ribosomal protein S10
- Chain 1n
- 30S ribosomal protein S14 type Z
- Chain 1v
- mRNA
- Chain 1w
- Transfer RNA; tRNA
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