IL_6XHW_310
3D structure
- PDB id
- 6XHW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
Loop
- Sequence
- GA*UGAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XHW_310 not in the Motif Atlas
- Geometric match to IL_4LFB_027
- Geometric discrepancy: 0.0992
- The information below is about IL_4LFB_027
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- Major groove platform
- Motif group
- IL_50694.7
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 27
Unit IDs
6XHW|1|2a|G|654
6XHW|1|2a|A|655
*
6XHW|1|2a|U|751
6XHW|1|2a|G|752
6XHW|1|2a|A|753
6XHW|1|2a|C|754
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2h
- 30S ribosomal protein S8
- Chain 2o
- 30S ribosomal protein S15
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