IL_6XHY_076
3D structure
- PDB id
- 6XHY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- ACGA*UCUAU
- Length
- 9 nucleotides
- Bulged bases
- 6XHY|1|1A|C|2055, 6XHY|1|1A|C|2612, 6XHY|1|1A|U|2613, 6XHY|1|1A|A|2614
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XHY_076 not in the Motif Atlas
- Homologous match to IL_7RQB_079
- Geometric discrepancy: 0.0574
- The information below is about IL_7RQB_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_01206.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6XHY|1|1A|A|2054
6XHY|1|1A|C|2055
6XHY|1|1A|G|2056
6XHY|1|1A|A|2057
*
6XHY|1|1A|U|2611
6XHY|1|1A|C|2612
6XHY|1|1A|U|2613
6XHY|1|1A|A|2614
6XHY|1|1A|U|2615
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 15
- 50S ribosomal protein L32
- Chain 1E
- 50S ribosomal protein L3
- Chain 1W
- 50S ribosomal protein L22
Coloring options: