IL_6XII_190

3D structure

PDB id

6XII (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation complex B (TTC-B) containing an 24 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

7 Å

Loop

Sequence

GGGGGAUAAC*GCUAAUACCGC

Length

21 nucleotides

Bulged bases

6XII|1|D|U|173

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XII|1|D|G|144
6XII|1|D|G|145
6XII|1|D|G|146
6XII|1|D|G|147
6XII|1|D|G|148
6XII|1|D|A|149
6XII|1|D|U|150
6XII|1|D|A|151
6XII|1|D|A|152
6XII|1|D|C|153
*
6XII|1|D|G|168
6XII|1|D|C|169
6XII|1|D|U|170
6XII|1|D|A|171
6XII|1|D|A|172
6XII|1|D|U|173
6XII|1|D|A|174
6XII|1|D|C|175
6XII|1|D|C|176
6XII|1|D|G|177
6XII|1|D|C|178

Current chains

Chain D

16S rRNA

Nearby chains

Chain E

30S ribosomal protein S20