3D structure

PDB id
6XIQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
Experimental method
ELECTRON MICROSCOPY
Resolution
4.2 Å

Loop

Sequence
CGUAU*AAG
Length
8 nucleotides
Bulged bases
6XIQ|1|1|A|1103
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6XIQ|1|1|C|977
6XIQ|1|1|G|978
6XIQ|1|1|U|979
6XIQ|1|1|A|980
6XIQ|1|1|U|981
*
6XIQ|1|1|A|1102
6XIQ|1|1|A|1103
6XIQ|1|1|G|1104

Current chains

Chain 1
35S ribosomal RNA

Nearby chains

Chain F
60S ribosomal protein L7-A
Chain Q
60S ribosomal protein L18-A
Chain b
RPL29 isoform 1

Coloring options:

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