IL_6XIQ_032

3D structure

PDB id

6XIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CGUAU*AAG

Length

8 nucleotides

Bulged bases

6XIQ|1|1|A|1103

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XIQ|1|1|C|977
6XIQ|1|1|G|978
6XIQ|1|1|U|979
6XIQ|1|1|A|980
6XIQ|1|1|U|981
*
6XIQ|1|1|A|1102
6XIQ|1|1|A|1103
6XIQ|1|1|G|1104

Current chains

Chain 1

35S ribosomal RNA

Nearby chains

Chain F

60S ribosomal protein L7-A

Chain Q

60S ribosomal protein L18-A

Chain b

RPL29 isoform 1