IL_6XIQ_054
3D structure
- PDB id
- 6XIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- UGACGAAGCCUAGAC*GUCGGGUCGAA
- Length
- 26 nucleotides
- Bulged bases
- 6XIQ|1|1|C|1391, 6XIQ|1|1|A|1399
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XIQ|1|1|U|1388
6XIQ|1|1|G|1389
6XIQ|1|1|A|1390
6XIQ|1|1|C|1391
6XIQ|1|1|G|1392
6XIQ|1|1|A|1393
6XIQ|1|1|A|1394
6XIQ|1|1|G|1395
6XIQ|1|1|C|1396
6XIQ|1|1|C|1397
6XIQ|1|1|U|1398
6XIQ|1|1|A|1399
6XIQ|1|1|G|1400
6XIQ|1|1|A|1401
6XIQ|1|1|C|1402
*
6XIQ|1|1|G|1409
6XIQ|1|1|U|1410
6XIQ|1|1|C|1411
6XIQ|1|1|G|1412
6XIQ|1|1|G|1413
6XIQ|1|1|G|1414
6XIQ|1|1|U|1415
6XIQ|1|1|C|1416
6XIQ|1|1|G|1417
6XIQ|1|1|A|1418
6XIQ|1|1|A|1419
Current chains
- Chain 1
- 35S ribosomal RNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain C
- RPL4A isoform 1
- Chain E
- 60S ribosomal protein L6-A
- Chain Y
- 60S ribosomal protein L26-A
- Chain e
- RPL32 isoform 1
Coloring options: