3D structure

PDB id
6XIQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
Experimental method
ELECTRON MICROSCOPY
Resolution
4.2 Å

Loop

Sequence
CUUAUCA*UCUUAUGG
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6XIQ|1|1|C|1701
6XIQ|1|1|U|1702
6XIQ|1|1|U|1703
6XIQ|1|1|A|1704
6XIQ|1|1|U|1705
6XIQ|1|1|C|1706
6XIQ|1|1|A|1707
*
6XIQ|1|1|U|1737
6XIQ|1|1|C|1738
6XIQ|1|1|U|1739
6XIQ|1|1|U|1740
6XIQ|1|1|A|1741
6XIQ|1|1|U|1742
6XIQ|1|1|G|1743
6XIQ|1|1|G|1744

Current chains

Chain 1
35S ribosomal RNA

Nearby chains

Chain Z
60S ribosomal protein L27-A
Chain g
60S ribosomal protein L34-A
Chain p
60S ribosomal protein L43-A

Coloring options:

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