IL_6XIQ_162

3D structure

PDB id

6XIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

GAAAAAAUUA*UAUAUUAGC

Length

19 nucleotides

Bulged bases

6XIQ|1|2|U|794

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XIQ|1|2|G|751
6XIQ|1|2|A|752
6XIQ|1|2|A|753
6XIQ|1|2|A|754
6XIQ|1|2|A|755
6XIQ|1|2|A|756
6XIQ|1|2|A|757
6XIQ|1|2|U|758
6XIQ|1|2|U|759
6XIQ|1|2|A|760
*
6XIQ|1|2|U|790
6XIQ|1|2|A|791
6XIQ|1|2|U|792
6XIQ|1|2|A|793
6XIQ|1|2|U|794
6XIQ|1|2|U|795
6XIQ|1|2|A|796
6XIQ|1|2|G|797
6XIQ|1|2|C|798

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain AB

40S ribosomal protein S11-A

Chain AM

RPS22A isoform 1

Chain u

40S ribosomal protein S4-A

Chain z

40S ribosomal protein S9-A