IL_6XIQ_163
3D structure
- PDB id
- 6XIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- ACGUUU*AUCGU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XIQ_163 not in the Motif Atlas
- Homologous match to IL_8P9A_416
- Geometric discrepancy: 0.5884
- The information below is about IL_8P9A_416
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XIQ|1|2|A|817
6XIQ|1|2|C|818
6XIQ|1|2|G|819
6XIQ|1|2|U|820
6XIQ|1|2|U|821
6XIQ|1|2|U|822
*
6XIQ|1|2|A|850
6XIQ|1|2|U|851
6XIQ|1|2|C|852
6XIQ|1|2|G|853
6XIQ|1|2|U|854
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain R
- 60S ribosomal protein L19-A
- Chain x
- 40S ribosomal protein S7-A
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