IL_6XIQ_191
3D structure
- PDB id
- 6XIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- CUAC*GAG
- Length
- 7 nucleotides
- Bulged bases
- 6XIQ|1|2|U|1340
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XIQ_191 not in the Motif Atlas
- Homologous match to IL_4V88_455
- Geometric discrepancy: 0.504
- The information below is about IL_4V88_455
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
6XIQ|1|2|C|1339
6XIQ|1|2|U|1340
6XIQ|1|2|A|1341
6XIQ|1|2|C|1342
*
6XIQ|1|2|G|1383
6XIQ|1|2|A|1384
6XIQ|1|2|G|1385
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain AG
- 40S ribosomal protein S16-A
- Chain AH
- 40S ribosomal protein S17-B
- Chain AK
- RPS20 isoform 1
- Chain AT
- RPS29A isoform 1
- Chain AV
- Guanine nucleotide-binding protein subunit beta-like protein
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