IL_6XIQ_211

3D structure

PDB id

6XIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

AGAAGGG*CUCCAUCU

Length

15 nucleotides

Bulged bases

6XIQ|1|2|A|1694, 6XIQ|1|2|G|1695, 6XIQ|1|2|G|1696, 6XIQ|1|2|U|1704

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XIQ|1|2|A|1691
6XIQ|1|2|G|1692
6XIQ|1|2|A|1693
6XIQ|1|2|A|1694
6XIQ|1|2|G|1695
6XIQ|1|2|G|1696
6XIQ|1|2|G|1697
*
6XIQ|1|2|C|1703
6XIQ|1|2|U|1704
6XIQ|1|2|C|1705
6XIQ|1|2|C|1706
6XIQ|1|2|A|1707
6XIQ|1|2|U|1708
6XIQ|1|2|C|1709
6XIQ|1|2|U|1710

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain w

40S ribosomal protein S6-A