IL_6XIQ_218

3D structure

PDB id

6XIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

UUGG*CUUUGUAA

Length

12 nucleotides

Bulged bases

6XIQ|1|1|G|170, 6XIQ|1|1|U|249, 6XIQ|1|1|U|252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XIQ|1|1|U|168
6XIQ|1|1|U|169
6XIQ|1|1|G|170
6XIQ|1|1|G|171
*
6XIQ|1|1|C|247
6XIQ|1|1|U|248
6XIQ|1|1|U|249
6XIQ|1|1|U|250
6XIQ|1|1|G|251
6XIQ|1|1|U|252
6XIQ|1|1|A|253
6XIQ|1|1|A|254

Current chains

Chain 1

35S ribosomal RNA

Nearby chains

Chain G

RPL8A isoform 1

Chain L

60S ribosomal protein L13-A

Chain h

60S ribosomal protein L35-A