IL_6XIQ_219
3D structure
- PDB id
- 6XIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GUGAAAUUG*CAACGGAUC
- Length
- 18 nucleotides
- Bulged bases
- 6XIQ|1|1|U|405, 6XIQ|1|4|U|18
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XIQ|1|1|G|404
6XIQ|1|1|U|405
6XIQ|1|1|G|406
6XIQ|1|1|A|407
6XIQ|1|1|A|408
6XIQ|1|1|A|409
6XIQ|1|1|U|410
6XIQ|1|1|U|411
6XIQ|1|1|G|412
*
6XIQ|1|4|C|11
6XIQ|1|4|A|12
6XIQ|1|4|A|13
6XIQ|1|4|C|14
6XIQ|1|4|G|15
6XIQ|1|4|G|16
6XIQ|1|4|A|17
6XIQ|1|4|U|18
6XIQ|1|4|C|19
Current chains
- Chain 1
- 35S ribosomal RNA
- Chain 4
- 5.8S ribosomal RNA
Nearby chains
- Chain C
- RPL4A isoform 1
- Chain P
- 60S ribosomal protein L17-A
- Chain e
- RPL32 isoform 1
- Chain l
- 60S ribosomal protein L39
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