IL_6XIQ_220
3D structure
- PDB id
- 6XIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GUGUUUGG*CCAUACGC
- Length
- 16 nucleotides
- Bulged bases
- 6XIQ|1|1|U|681, 6XIQ|1|1|U|682, 6XIQ|1|1|U|683, 6XIQ|1|1|U|698, 6XIQ|1|1|A|699
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XIQ|1|1|G|678
6XIQ|1|1|U|679
6XIQ|1|1|G|680
6XIQ|1|1|U|681
6XIQ|1|1|U|682
6XIQ|1|1|U|683
6XIQ|1|1|G|684
6XIQ|1|1|G|685
*
6XIQ|1|1|C|695
6XIQ|1|1|C|696
6XIQ|1|1|A|697
6XIQ|1|1|U|698
6XIQ|1|1|A|699
6XIQ|1|1|C|700
6XIQ|1|1|G|701
6XIQ|1|1|C|702
Current chains
- Chain 1
- 35S ribosomal RNA
Nearby chains
- Chain C
- RPL4A isoform 1
- Chain L
- 60S ribosomal protein L13-A
- Chain N
- 60S ribosomal protein L15-A
- Chain Q
- 60S ribosomal protein L18-A
- Chain a
- 60S ribosomal protein L28
Coloring options: