IL_6XIQ_234

3D structure

PDB id

6XIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CAC*GCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6XIQ_234 not in the Motif Atlas

Geometric match to IL_6RTI_005

Geometric discrepancy: 0.364

The information below is about IL_6RTI_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_14688.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

5

Unit IDs

6XIQ|1|1|C|3164
6XIQ|1|1|A|3165
6XIQ|1|1|C|3166
*
6XIQ|1|1|G|3284
6XIQ|1|1|C|3285
6XIQ|1|1|G|3286

Current chains

Chain 1

35S ribosomal RNA

Nearby chains