IL_6XIQ_235

3D structure

PDB id

6XIQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CAAUA*UUUUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XIQ|1|1|C|3166
6XIQ|1|1|A|3167
6XIQ|1|1|A|3168
6XIQ|1|1|U|3169
6XIQ|1|1|A|3170
*
6XIQ|1|1|U|3280
6XIQ|1|1|U|3281
6XIQ|1|1|U|3282
6XIQ|1|1|U|3283
6XIQ|1|1|G|3284

Current chains

Chain 1

35S ribosomal RNA

Nearby chains

Chain f

60S ribosomal protein L33-A