IL_6XIQ_238
3D structure
- PDB id
- 6XIQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- CAUUUGUAUACGACUUAGAUGUACAACGGGGUAUUGUAAG*CUGAGAUUAAGCCUUUGUUGUCUG
- Length
- 64 nucleotides
- Bulged bases
- 6XIQ|1|1|U|3301, 6XIQ|1|1|U|3304, 6XIQ|1|1|A|3305, 6XIQ|1|1|U|3306, 6XIQ|1|1|A|3307, 6XIQ|1|1|U|3319, 6XIQ|1|1|U|3334, 6XIQ|1|1|A|3375, 6XIQ|1|1|A|3376, 6XIQ|1|1|G|3377, 6XIQ|1|1|U|3382
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6XIQ|1|1|C|3298
6XIQ|1|1|A|3299
6XIQ|1|1|U|3300
6XIQ|1|1|U|3301
6XIQ|1|1|U|3302
6XIQ|1|1|G|3303
6XIQ|1|1|U|3304
6XIQ|1|1|A|3305
6XIQ|1|1|U|3306
6XIQ|1|1|A|3307
6XIQ|1|1|C|3308
6XIQ|1|1|G|3309
6XIQ|1|1|A|3310
6XIQ|1|1|C|3311
6XIQ|1|1|U|3312
6XIQ|1|1|U|3313
6XIQ|1|1|A|3314
6XIQ|1|1|G|3315
6XIQ|1|1|A|3316
6XIQ|1|1|U|3317
6XIQ|1|1|G|3318
6XIQ|1|1|U|3319
6XIQ|1|1|A|3320
6XIQ|1|1|C|3321
6XIQ|1|1|A|3322
6XIQ|1|1|A|3323
6XIQ|1|1|C|3324
6XIQ|1|1|G|3325
6XIQ|1|1|G|3326
6XIQ|1|1|G|3327
6XIQ|1|1|G|3328
6XIQ|1|1|U|3329
6XIQ|1|1|A|3330
6XIQ|1|1|U|3331
6XIQ|1|1|U|3332
6XIQ|1|1|G|3333
6XIQ|1|1|U|3334
6XIQ|1|1|A|3335
6XIQ|1|1|A|3336
6XIQ|1|1|G|3337
*
6XIQ|1|1|C|3367
6XIQ|1|1|U|3368
6XIQ|1|1|G|3369
6XIQ|1|1|A|3370
6XIQ|1|1|G|3371
6XIQ|1|1|A|3372
6XIQ|1|1|U|3373
6XIQ|1|1|U|3374
6XIQ|1|1|A|3375
6XIQ|1|1|A|3376
6XIQ|1|1|G|3377
6XIQ|1|1|C|3378
6XIQ|1|1|C|3379
6XIQ|1|1|U|3380
6XIQ|1|1|U|3381
6XIQ|1|1|U|3382
6XIQ|1|1|G|3383
6XIQ|1|1|U|3384
6XIQ|1|1|U|3385
6XIQ|1|1|G|3386
6XIQ|1|1|U|3387
6XIQ|1|1|C|3388
6XIQ|1|1|U|3389
6XIQ|1|1|G|3390
Current chains
- Chain 1
- 35S ribosomal RNA
Nearby chains
- Chain B
- RPL3 isoform 1
- Chain P
- 60S ribosomal protein L17-A
- Chain W
- RPL24A isoform 1
- Chain d
- 60S ribosomal protein L31-A
Coloring options: